Package: CORE 3.2
CORE: Cores of Recurrent Events
Given a collection of intervals with integer start and end positions, find recurrently targeted regions and estimate the significance of finding. Randomization is implemented by parallel methods, either using local host machines, or submitting grid engine jobs.
Authors:
CORE_3.2.tar.gz
CORE_3.2.zip(r-4.5)CORE_3.2.zip(r-4.4)CORE_3.2.zip(r-4.3)
CORE_3.2.tgz(r-4.4-any)CORE_3.2.tgz(r-4.3-any)
CORE_3.2.tar.gz(r-4.5-noble)CORE_3.2.tar.gz(r-4.4-noble)
CORE_3.2.tgz(r-4.4-emscripten)CORE_3.2.tgz(r-4.3-emscripten)
CORE.pdf |CORE.html✨
CORE/json (API)
| # Install 'CORE' in R: |
| install.packages('CORE', repos = c('https://gsun2018.r-universe.dev', 'https://cloud.r-project.org')) |
- testInputBoundaries - A table of chromosome boundary positions for DNA copy number analysis
- testInputCORE - A table of DNA copy number gain events observed in 100 individual tumor cells
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 2 years agofrom:ab00adf1f3. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Sep 18 2024 |
| R-4.5-win | OK | Sep 18 2024 |
| R-4.5-linux | OK | Sep 18 2024 |
| R-4.4-win | OK | Sep 18 2024 |
| R-4.4-mac | OK | Sep 18 2024 |
| R-4.3-win | OK | Sep 18 2024 |
| R-4.3-mac | OK | Sep 18 2024 |
Exports:CORE
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Cores of Recurrent Events | CORE |
| A table of chromosome boundary positions for DNA copy number analysis | testInputBoundaries |
| A table of DNA copy number gain events observed in 100 individual tumor cells | testInputCORE |
